Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000716895_00798 | GCA_000716895_01338 | GCA_000716895_00798 | GCA_000716895_01338 | Unannotated protein. | Unannotated protein. | 0.925 |
GCA_000716895_00798 | GCA_000716895_02941 | GCA_000716895_00798 | GCA_000716895_02941 | Unannotated protein. | Unannotated protein. | 0.993 |
GCA_000716895_00798 | GCA_000716895_03067 | GCA_000716895_00798 | GCA_000716895_03067 | Unannotated protein. | Unannotated protein. | 0.972 |
GCA_000716895_00798 | GCA_000716895_03856 | GCA_000716895_00798 | GCA_000716895_03856 | Unannotated protein. | Unannotated protein. | 0.838 |
GCA_000716895_00798 | GCA_000716895_04272 | GCA_000716895_00798 | GCA_000716895_04272 | Unannotated protein. | Unannotated protein. | 0.552 |
GCA_000716895_00798 | GCA_000716895_06399 | GCA_000716895_00798 | GCA_000716895_06399 | Unannotated protein. | Unannotated protein. | 0.925 |
GCA_000716895_00798 | rpmB | GCA_000716895_00798 | GCA_000716895_03070 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.742 |
GCA_000716895_00798 | rpmG_2 | GCA_000716895_00798 | GCA_000716895_03069 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bL33 family. | 0.864 |
GCA_000716895_00798 | rpsR_2 | GCA_000716895_00798 | GCA_000716895_03068 | Unannotated protein. | Unannotated protein; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.878 |
GCA_000716895_01338 | GCA_000716895_00798 | GCA_000716895_01338 | GCA_000716895_00798 | Unannotated protein. | Unannotated protein. | 0.925 |
GCA_000716895_01338 | GCA_000716895_02941 | GCA_000716895_01338 | GCA_000716895_02941 | Unannotated protein. | Unannotated protein. | 0.982 |
GCA_000716895_01338 | GCA_000716895_03067 | GCA_000716895_01338 | GCA_000716895_03067 | Unannotated protein. | Unannotated protein. | 0.979 |
GCA_000716895_01338 | GCA_000716895_04272 | GCA_000716895_01338 | GCA_000716895_04272 | Unannotated protein. | Unannotated protein. | 0.491 |
GCA_000716895_02941 | GCA_000716895_00798 | GCA_000716895_02941 | GCA_000716895_00798 | Unannotated protein. | Unannotated protein. | 0.993 |
GCA_000716895_02941 | GCA_000716895_01338 | GCA_000716895_02941 | GCA_000716895_01338 | Unannotated protein. | Unannotated protein. | 0.982 |
GCA_000716895_02941 | GCA_000716895_03067 | GCA_000716895_02941 | GCA_000716895_03067 | Unannotated protein. | Unannotated protein. | 0.976 |
GCA_000716895_02941 | GCA_000716895_03856 | GCA_000716895_02941 | GCA_000716895_03856 | Unannotated protein. | Unannotated protein. | 0.943 |
GCA_000716895_02941 | GCA_000716895_04272 | GCA_000716895_02941 | GCA_000716895_04272 | Unannotated protein. | Unannotated protein. | 0.610 |
GCA_000716895_02941 | GCA_000716895_06399 | GCA_000716895_02941 | GCA_000716895_06399 | Unannotated protein. | Unannotated protein. | 0.982 |
GCA_000716895_02941 | rpmB | GCA_000716895_02941 | GCA_000716895_03070 | Unannotated protein. | Unannotated protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.827 |
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