Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000716895_00680 | GCA_000716895_00838 | GCA_000716895_00680 | GCA_000716895_00838 | Unannotated protein. | Unannotated protein. | 0.867 |
GCA_000716895_00680 | GCA_000716895_03441 | GCA_000716895_00680 | GCA_000716895_03441 | Unannotated protein. | Unannotated protein. | 0.969 |
GCA_000716895_00680 | GCA_000716895_03442 | GCA_000716895_00680 | GCA_000716895_03442 | Unannotated protein. | Unannotated protein. | 0.745 |
GCA_000716895_00680 | GCA_000716895_05121 | GCA_000716895_00680 | GCA_000716895_05121 | Unannotated protein. | Unannotated protein. | 0.997 |
GCA_000716895_00680 | GCA_000716895_05327 | GCA_000716895_00680 | GCA_000716895_05327 | Unannotated protein. | Unannotated protein. | 0.967 |
GCA_000716895_00680 | NCTC630_00724 | GCA_000716895_00680 | GCA_000716895_03658 | Unannotated protein. | Unannotated protein. | 0.432 |
GCA_000716895_00680 | hisS | GCA_000716895_00680 | GCA_000716895_03440 | Unannotated protein. | Unannotated protein. | 0.534 |
GCA_000716895_00680 | moeZ | GCA_000716895_00680 | GCA_000716895_00516 | Unannotated protein. | Unannotated protein. | 0.929 |
GCA_000716895_00680 | relA | GCA_000716895_00680 | GCA_000716895_03446 | Unannotated protein. | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.913 |
GCA_000716895_00838 | GCA_000716895_00680 | GCA_000716895_00838 | GCA_000716895_00680 | Unannotated protein. | Unannotated protein. | 0.867 |
GCA_000716895_00838 | GCA_000716895_03441 | GCA_000716895_00838 | GCA_000716895_03441 | Unannotated protein. | Unannotated protein. | 0.988 |
GCA_000716895_00838 | GCA_000716895_03442 | GCA_000716895_00838 | GCA_000716895_03442 | Unannotated protein. | Unannotated protein. | 0.837 |
GCA_000716895_00838 | GCA_000716895_05121 | GCA_000716895_00838 | GCA_000716895_05121 | Unannotated protein. | Unannotated protein. | 0.994 |
GCA_000716895_00838 | GCA_000716895_05327 | GCA_000716895_00838 | GCA_000716895_05327 | Unannotated protein. | Unannotated protein. | 0.962 |
GCA_000716895_00838 | hisS | GCA_000716895_00838 | GCA_000716895_03440 | Unannotated protein. | Unannotated protein. | 0.853 |
GCA_000716895_00838 | moeZ | GCA_000716895_00838 | GCA_000716895_00516 | Unannotated protein. | Unannotated protein. | 0.969 |
GCA_000716895_00838 | relA | GCA_000716895_00838 | GCA_000716895_03446 | Unannotated protein. | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.542 |
GCA_000716895_03439 | GCA_000716895_03441 | GCA_000716895_03439 | GCA_000716895_03441 | Unannotated protein. | Unannotated protein. | 0.996 |
GCA_000716895_03439 | GCA_000716895_03442 | GCA_000716895_03439 | GCA_000716895_03442 | Unannotated protein. | Unannotated protein. | 0.993 |
GCA_000716895_03439 | hisS | GCA_000716895_03439 | GCA_000716895_03440 | Unannotated protein. | Unannotated protein. | 0.996 |
page 1 of 5