Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000716895_00741 | GCA_000716895_02062 | GCA_000716895_00741 | GCA_000716895_02062 | Unannotated protein. | Unannotated protein. | 0.833 |
GCA_000716895_00741 | GCA_000716895_02679 | GCA_000716895_00741 | GCA_000716895_02679 | Unannotated protein. | Unannotated protein. | 0.549 |
GCA_000716895_00741 | GCA_000716895_03372 | GCA_000716895_00741 | GCA_000716895_03372 | Unannotated protein. | Unannotated protein. | 0.982 |
GCA_000716895_00741 | GCA_000716895_03562 | GCA_000716895_00741 | GCA_000716895_03562 | Unannotated protein. | Unannotated protein. | 0.919 |
GCA_000716895_00741 | GCA_000716895_04668 | GCA_000716895_00741 | GCA_000716895_04668 | Unannotated protein. | Unannotated protein. | 0.983 |
GCA_000716895_00741 | GCA_000716895_05639 | GCA_000716895_00741 | GCA_000716895_05639 | Unannotated protein. | Unannotated protein. | 0.963 |
GCA_000716895_00741 | GCA_000716895_06366 | GCA_000716895_00741 | GCA_000716895_06366 | Unannotated protein. | Unannotated protein. | 0.667 |
GCA_000716895_00741 | NCTC630_00434 | GCA_000716895_00741 | GCA_000716895_00399 | Unannotated protein. | Unannotated protein. | 0.957 |
GCA_000716895_00741 | relA | GCA_000716895_00741 | GCA_000716895_03446 | Unannotated protein. | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.964 |
GCA_000716895_02062 | GCA_000716895_00741 | GCA_000716895_02062 | GCA_000716895_00741 | Unannotated protein. | Unannotated protein. | 0.833 |
GCA_000716895_02062 | GCA_000716895_02679 | GCA_000716895_02062 | GCA_000716895_02679 | Unannotated protein. | Unannotated protein. | 0.412 |
GCA_000716895_02062 | GCA_000716895_03562 | GCA_000716895_02062 | GCA_000716895_03562 | Unannotated protein. | Unannotated protein. | 0.913 |
GCA_000716895_02062 | GCA_000716895_04668 | GCA_000716895_02062 | GCA_000716895_04668 | Unannotated protein. | Unannotated protein. | 0.850 |
GCA_000716895_02062 | GCA_000716895_05639 | GCA_000716895_02062 | GCA_000716895_05639 | Unannotated protein. | Unannotated protein. | 0.966 |
GCA_000716895_02062 | GCA_000716895_06366 | GCA_000716895_02062 | GCA_000716895_06366 | Unannotated protein. | Unannotated protein. | 0.772 |
GCA_000716895_02062 | NCTC630_00434 | GCA_000716895_02062 | GCA_000716895_00399 | Unannotated protein. | Unannotated protein. | 0.957 |
GCA_000716895_02062 | relA | GCA_000716895_02062 | GCA_000716895_03446 | Unannotated protein. | Unannotated protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.966 |
GCA_000716895_02679 | GCA_000716895_00741 | GCA_000716895_02679 | GCA_000716895_00741 | Unannotated protein. | Unannotated protein. | 0.549 |
GCA_000716895_02679 | GCA_000716895_02062 | GCA_000716895_02679 | GCA_000716895_02062 | Unannotated protein. | Unannotated protein. | 0.412 |
GCA_000716895_02679 | GCA_000716895_03372 | GCA_000716895_02679 | GCA_000716895_03372 | Unannotated protein. | Unannotated protein. | 0.951 |
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