Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000716895_00741 | GCA_000716895_00773 | GCA_000716895_00741 | GCA_000716895_00773 | Unannotated protein. | Unannotated protein. | 0.982 |
GCA_000716895_00741 | GCA_000716895_01453 | GCA_000716895_00741 | GCA_000716895_01453 | Unannotated protein. | Unannotated protein. | 0.653 |
GCA_000716895_00741 | GCA_000716895_03096 | GCA_000716895_00741 | GCA_000716895_03096 | Unannotated protein. | Unannotated protein. | 0.907 |
GCA_000716895_00741 | GCA_000716895_03643 | GCA_000716895_00741 | GCA_000716895_03643 | Unannotated protein. | Unannotated protein. | 0.938 |
GCA_000716895_00741 | GCA_000716895_05011 | GCA_000716895_00741 | GCA_000716895_05011 | Unannotated protein. | Unannotated protein. | 0.655 |
GCA_000716895_00741 | guaA | GCA_000716895_00741 | GCA_000716895_00718 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.943 |
GCA_000716895_00741 | guaB | GCA_000716895_00741 | GCA_000716895_00721 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.982 |
GCA_000716895_00741 | lexA_1 | GCA_000716895_00741 | GCA_000716895_03644 | Unannotated protein. | Unannotated protein; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.653 |
GCA_000716895_00741 | lytC_4 | GCA_000716895_00741 | GCA_000716895_04111 | Unannotated protein. | Unannotated protein. | 0.993 |
GCA_000716895_00773 | GCA_000716895_00741 | GCA_000716895_00773 | GCA_000716895_00741 | Unannotated protein. | Unannotated protein. | 0.982 |
GCA_000716895_00773 | GCA_000716895_03096 | GCA_000716895_00773 | GCA_000716895_03096 | Unannotated protein. | Unannotated protein. | 0.635 |
GCA_000716895_00773 | GCA_000716895_03643 | GCA_000716895_00773 | GCA_000716895_03643 | Unannotated protein. | Unannotated protein. | 0.927 |
GCA_000716895_00773 | GCA_000716895_05011 | GCA_000716895_00773 | GCA_000716895_05011 | Unannotated protein. | Unannotated protein. | 0.776 |
GCA_000716895_00773 | guaA | GCA_000716895_00773 | GCA_000716895_00718 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.999 |
GCA_000716895_00773 | guaB | GCA_000716895_00773 | GCA_000716895_00721 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.986 |
GCA_000716895_00773 | lytC_4 | GCA_000716895_00773 | GCA_000716895_04111 | Unannotated protein. | Unannotated protein. | 0.636 |
GCA_000716895_00773 | ndrR | GCA_000716895_00773 | GCA_000716895_03642 | Unannotated protein. | Unannotated protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. | 0.707 |
GCA_000716895_01453 | GCA_000716895_00741 | GCA_000716895_01453 | GCA_000716895_00741 | Unannotated protein. | Unannotated protein. | 0.653 |
GCA_000716895_01453 | GCA_000716895_03096 | GCA_000716895_01453 | GCA_000716895_03096 | Unannotated protein. | Unannotated protein. | 0.418 |
GCA_000716895_01453 | GCA_000716895_03643 | GCA_000716895_01453 | GCA_000716895_03643 | Unannotated protein. | Unannotated protein. | 0.937 |
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