Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000716895_00093 | GCA_000716895_03390 | GCA_000716895_00093 | GCA_000716895_03390 | Unannotated protein. | Unannotated protein. | 0.988 |
GCA_000716895_00093 | GCA_000716895_03783 | GCA_000716895_00093 | GCA_000716895_03783 | Unannotated protein. | Unannotated protein. | 0.974 |
GCA_000716895_00093 | GCA_000716895_04265 | GCA_000716895_00093 | GCA_000716895_04265 | Unannotated protein. | Unannotated protein. | 0.988 |
GCA_000716895_00093 | GCA_000716895_06176 | GCA_000716895_00093 | GCA_000716895_06176 | Unannotated protein. | Unannotated protein. | 0.921 |
GCA_000716895_00093 | gltB_2 | GCA_000716895_00093 | GCA_000716895_04171 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000716895_00093 | guaA | GCA_000716895_00093 | GCA_000716895_00718 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.999 |
GCA_000716895_00093 | guaB | GCA_000716895_00093 | GCA_000716895_00721 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.999 |
GCA_000716895_00093 | metH | GCA_000716895_00093 | GCA_000716895_01231 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.921 |
GCA_000716895_00093 | purHJ | GCA_000716895_00093 | GCA_000716895_03050 | Unannotated protein. | Unannotated protein. | 0.997 |
GCA_000716895_00093 | ribBA | GCA_000716895_00093 | GCA_000716895_01498 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.981 |
GCA_000716895_03390 | GCA_000716895_00093 | GCA_000716895_03390 | GCA_000716895_00093 | Unannotated protein. | Unannotated protein. | 0.988 |
GCA_000716895_03390 | GCA_000716895_03783 | GCA_000716895_03390 | GCA_000716895_03783 | Unannotated protein. | Unannotated protein. | 0.987 |
GCA_000716895_03390 | GCA_000716895_04265 | GCA_000716895_03390 | GCA_000716895_04265 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000716895_03390 | GCA_000716895_06176 | GCA_000716895_03390 | GCA_000716895_06176 | Unannotated protein. | Unannotated protein. | 0.922 |
GCA_000716895_03390 | gltB_2 | GCA_000716895_03390 | GCA_000716895_04171 | Unannotated protein. | Unannotated protein. | 0.988 |
GCA_000716895_03390 | guaA | GCA_000716895_03390 | GCA_000716895_00718 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.985 |
GCA_000716895_03390 | guaB | GCA_000716895_03390 | GCA_000716895_00721 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.990 |
GCA_000716895_03390 | metH | GCA_000716895_03390 | GCA_000716895_01231 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.922 |
GCA_000716895_03390 | purHJ | GCA_000716895_03390 | GCA_000716895_03050 | Unannotated protein. | Unannotated protein. | 0.805 |
GCA_000716895_03783 | GCA_000716895_00093 | GCA_000716895_03783 | GCA_000716895_00093 | Unannotated protein. | Unannotated protein. | 0.974 |
page 1 of 6