Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000716895_00387 | GCA_000716895_01184 | GCA_000716895_00387 | GCA_000716895_01184 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000716895_00387 | GCA_000716895_01706 | GCA_000716895_00387 | GCA_000716895_01706 | Unannotated protein. | Unannotated protein. | 0.829 |
GCA_000716895_00387 | GCA_000716895_04456 | GCA_000716895_00387 | GCA_000716895_04456 | Unannotated protein. | Unannotated protein. | 0.997 |
GCA_000716895_00387 | GCA_000716895_04904 | GCA_000716895_00387 | GCA_000716895_04904 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000716895_00387 | moeZ | GCA_000716895_00387 | GCA_000716895_00516 | Unannotated protein. | Unannotated protein. | 0.962 |
GCA_000716895_00387 | thiD | GCA_000716895_00387 | GCA_000716895_04457 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000716895_00387 | thiE | GCA_000716895_00387 | GCA_000716895_04465 | Unannotated protein. | Unannotated protein; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.999 |
GCA_000716895_00387 | thiG | GCA_000716895_00387 | GCA_000716895_04462 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.978 |
GCA_000716895_01184 | GCA_000716895_00387 | GCA_000716895_01184 | GCA_000716895_00387 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000716895_01184 | GCA_000716895_01706 | GCA_000716895_01184 | GCA_000716895_01706 | Unannotated protein. | Unannotated protein. | 0.657 |
GCA_000716895_01184 | GCA_000716895_03952 | GCA_000716895_01184 | GCA_000716895_03952 | Unannotated protein. | Unannotated protein. | 0.951 |
GCA_000716895_01184 | GCA_000716895_04456 | GCA_000716895_01184 | GCA_000716895_04456 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_000716895_01184 | GCA_000716895_04904 | GCA_000716895_01184 | GCA_000716895_04904 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000716895_01184 | moeZ | GCA_000716895_01184 | GCA_000716895_00516 | Unannotated protein. | Unannotated protein. | 0.992 |
GCA_000716895_01184 | rsgA_1 | GCA_000716895_01184 | GCA_000716895_00539 | Unannotated protein. | Unannotated protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.951 |
GCA_000716895_01184 | thiD | GCA_000716895_01184 | GCA_000716895_04457 | Unannotated protein. | Unannotated protein. | 0.601 |
GCA_000716895_01184 | thiE | GCA_000716895_01184 | GCA_000716895_04465 | Unannotated protein. | Unannotated protein; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.999 |
GCA_000716895_01184 | thiG | GCA_000716895_01184 | GCA_000716895_04462 | Unannotated protein. | Unannotated protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.995 |
GCA_000716895_01706 | GCA_000716895_00387 | GCA_000716895_01706 | GCA_000716895_00387 | Unannotated protein. | Unannotated protein. | 0.829 |
GCA_000716895_01706 | GCA_000716895_01184 | GCA_000716895_01706 | GCA_000716895_01184 | Unannotated protein. | Unannotated protein. | 0.657 |
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