Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_000716895_00093 | GCA_000716895_00323 | GCA_000716895_00093 | GCA_000716895_00323 | Unannotated protein. | Unannotated protein. | 0.906 |
GCA_000716895_00093 | GCA_000716895_00498 | GCA_000716895_00093 | GCA_000716895_00498 | Unannotated protein. | Unannotated protein. | 0.923 |
GCA_000716895_00093 | GCA_000716895_01930 | GCA_000716895_00093 | GCA_000716895_01930 | Unannotated protein. | Unannotated protein. | 0.710 |
GCA_000716895_00093 | GCA_000716895_03285 | GCA_000716895_00093 | GCA_000716895_03285 | Unannotated protein. | Unannotated protein. | 0.521 |
GCA_000716895_00093 | GCA_000716895_05327 | GCA_000716895_00093 | GCA_000716895_05327 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000716895_00093 | GCA_000716895_06167 | GCA_000716895_00093 | GCA_000716895_06167 | Unannotated protein. | Unannotated protein. | 0.938 |
GCA_000716895_00093 | pheT | GCA_000716895_00093 | GCA_000716895_00021 | Unannotated protein. | Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.999 |
GCA_000716895_00093 | polA_2 | GCA_000716895_00093 | GCA_000716895_00075 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.969 |
GCA_000716895_00093 | recA | GCA_000716895_00093 | GCA_000716895_03666 | Unannotated protein. | Unannotated protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.884 |
GCA_000716895_00093 | rsmB | GCA_000716895_00093 | GCA_000716895_01503 | Unannotated protein. | Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.997 |
GCA_000716895_00323 | GCA_000716895_00093 | GCA_000716895_00323 | GCA_000716895_00093 | Unannotated protein. | Unannotated protein. | 0.906 |
GCA_000716895_00323 | GCA_000716895_00498 | GCA_000716895_00323 | GCA_000716895_00498 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000716895_00323 | GCA_000716895_01930 | GCA_000716895_00323 | GCA_000716895_01930 | Unannotated protein. | Unannotated protein. | 0.871 |
GCA_000716895_00323 | GCA_000716895_03285 | GCA_000716895_00323 | GCA_000716895_03285 | Unannotated protein. | Unannotated protein. | 0.978 |
GCA_000716895_00323 | GCA_000716895_05327 | GCA_000716895_00323 | GCA_000716895_05327 | Unannotated protein. | Unannotated protein. | 0.940 |
GCA_000716895_00323 | GCA_000716895_06167 | GCA_000716895_00323 | GCA_000716895_06167 | Unannotated protein. | Unannotated protein. | 0.962 |
GCA_000716895_00323 | pheT | GCA_000716895_00323 | GCA_000716895_00021 | Unannotated protein. | Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.997 |
GCA_000716895_00323 | polA_2 | GCA_000716895_00323 | GCA_000716895_00075 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
GCA_000716895_00323 | recA | GCA_000716895_00323 | GCA_000716895_03666 | Unannotated protein. | Unannotated protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.982 |
GCA_000716895_00323 | rsmB | GCA_000716895_00323 | GCA_000716895_01503 | Unannotated protein. | Unannotated protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.996 |
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