Lepil_3583 protein (Leptonema illini) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

Lepil_3583

Unannotated protein. (543 aa)

Predicted Functional Partners:

rplO

0.840

rplU

0.835

rpsO

0.830

rplD

0.829

rplM

0.828

rpsC

0.827

rplC

0.819

rpsG

0.818

rpsD

0.817

rplW

0.816

Your Current Organism:

Leptonema illini

NCBI taxonomy Id: 183
Other names: DSM 21528, L. illini, Leptospira illini, NCTC 11301, strain 3055

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Lepil_3583	rplC	GCA_002009735_00758	GCA_002009735_02711	Unannotated protein.	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.819
Lepil_3583	rplD	GCA_002009735_00758	GCA_002009735_02712	Unannotated protein.	Unannotated protein; Forms part of the polypeptide exit tunnel.	0.829
Lepil_3583	rplM	GCA_002009735_00758	GCA_002009735_00837	Unannotated protein.	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.828
Lepil_3583	rplO	GCA_002009735_00758	GCA_002009735_02730	Unannotated protein.	Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.840
Lepil_3583	rplU	GCA_002009735_00758	GCA_002009735_00260	Unannotated protein.	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.835
Lepil_3583	rplW	GCA_002009735_00758	GCA_002009735_02713	Unannotated protein.	Unannotated protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.816
Lepil_3583	rpsC	GCA_002009735_00758	GCA_002009735_02717	Unannotated protein.	Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.827
Lepil_3583	rpsD	GCA_002009735_00758	GCA_002009735_00540	Unannotated protein.	Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.817
Lepil_3583	rpsG	GCA_002009735_00758	GCA_002009735_02707	Unannotated protein.	Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.818
Lepil_3583	rpsO	GCA_002009735_00758	GCA_002009735_02435	Unannotated protein.	Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.830
rplC	Lepil_3583	GCA_002009735_02711	GCA_002009735_00758	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Unannotated protein.	0.819
rplC	rplD	GCA_002009735_02711	GCA_002009735_02712	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Unannotated protein; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplM	GCA_002009735_02711	GCA_002009735_00837	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Unannotated protein; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplC	rplO	GCA_002009735_02711	GCA_002009735_02730	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Unannotated protein; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplC	rplU	GCA_002009735_02711	GCA_002009735_00260	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Unannotated protein; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.994
rplC	rplW	GCA_002009735_02711	GCA_002009735_02713	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Unannotated protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.999
rplC	rpsC	GCA_002009735_02711	GCA_002009735_02717	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.999
rplC	rpsD	GCA_002009735_02711	GCA_002009735_00540	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.997
rplC	rpsG	GCA_002009735_02711	GCA_002009735_02707	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Unannotated protein; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.	0.998
rplC	rpsO	GCA_002009735_02711	GCA_002009735_02435	Unannotated protein; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Unannotated protein; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.996