STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAMN05443507_11443DUF4430 domain-containing protein. (270 aa)    
Predicted Functional Partners:
SAMN05443507_11439
Prenyltransferase and squalene oxidase repeat-containing protein.
 
     0.916
SAMN05443507_11440
Energy-coupling factor transport system substrate-specific component.
 
     0.912
SAMN05443507_11441
Energy-coupling factor transport system ATP-binding protein.
 
     0.832
SAMN05443507_11442
Energy-coupling factor transporter transmembrane protein EcfT.
       0.798
SAMN05443507_11750
SIR2-like domain-containing protein.
  
     0.736
SAMN05443507_11952
Plasmid segregation protein ParM.
  
     0.700
SAMN05443507_11733
Uncharacterized protein.
  
     0.662
SAMN05443507_11528
ALP_N domain-containing protein.
  
     0.657
SAMN05443507_10310
DUF262 domain-containing protein.
  
     0.648
SAMN05443507_10322
Uncharacterized protein.
  
     0.646
Your Current Organism:
Alicyclobacillus montanus
NCBI taxonomy Id: 1830138
Other names: A. montanus, Alicyclobacillus sp. USBA-GBX-503, CBMAI1927, CMPUJ UGB U503, strain USBA-GBX-503
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