STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBK33953.1Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (406 aa)    
Predicted Functional Partners:
OBK32122.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.951
OBK32123.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.951
OBK32124.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.951
OBK41111.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.947
OBK35451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.913
OBK33995.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
     
 0.892
OBK36128.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.843
A5658_18635
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.831
OBK33954.1
GTP pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.733
OBK34768.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.720
Your Current Organism:
Mycobacterium sp. 12451111
NCBI taxonomy Id: 1834073
Other names: M. sp. 1245111.1, Mycobacterium sp. 1245111.1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.