OBJ01114.1 protein (Mycobacterium sp. 14657030)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

OBJ01114.1

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)

Predicted Functional Partners:

OBJ01112.1

0.997

OBJ01113.1

0.997

OBJ01146.1

0.989

OBJ10346.1

0.933

OBJ10370.1

0.923

OBJ10345.1

0.879

OBJ01111.1

0.865

OBJ10369.1

0.822

OBJ01147.1

0.755

OBI96460.1

0.688

Your Current Organism:

Mycobacterium sp. 14657030

NCBI taxonomy Id: 1834078
Other names: M. sp. 1465703.0, Mycobacterium sp. 1465703.0

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OBI96460.1	OBJ01114.1	A5625_07510	A5625_25660	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.688
OBJ01111.1	OBJ01112.1	A5625_25640	A5625_25650	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.865
OBJ01111.1	OBJ01113.1	A5625_25640	A5625_25655	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
OBJ01111.1	OBJ01114.1	A5625_25640	A5625_25660	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.865
OBJ01111.1	OBJ01146.1	A5625_25640	A5625_25645	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.870
OBJ01111.1	OBJ01147.1	A5625_25640	A5625_25665	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.724
OBJ01112.1	OBJ01111.1	A5625_25650	A5625_25640	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.865
OBJ01112.1	OBJ01113.1	A5625_25650	A5625_25655	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OBJ01112.1	OBJ01114.1	A5625_25650	A5625_25660	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OBJ01112.1	OBJ01146.1	A5625_25650	A5625_25645	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.999
OBJ01112.1	OBJ01147.1	A5625_25650	A5625_25665	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
OBJ01112.1	OBJ10345.1	A5625_25650	A5625_11775	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.988
OBJ01112.1	OBJ10369.1	A5625_25650	A5625_11770	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
OBJ01112.1	OBJ10370.1	A5625_25650	A5625_11785	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.990
OBJ01113.1	OBJ01111.1	A5625_25655	A5625_25640	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.870
OBJ01113.1	OBJ01112.1	A5625_25655	A5625_25650	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OBJ01113.1	OBJ01114.1	A5625_25655	A5625_25660	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OBJ01113.1	OBJ01146.1	A5625_25655	A5625_25645	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.998
OBJ01113.1	OBJ01147.1	A5625_25655	A5625_25665	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
OBJ01113.1	OBJ10345.1	A5625_25655	A5625_11775	ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.	0.969