STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBF56323.1Peptidase S15; Derived by automated computational analysis using gene prediction method: Protein Homology. (570 aa)    
Predicted Functional Partners:
OBF56324.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.729
OBF56322.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.
       0.628
OBF56325.1
D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
       0.597
OBF56321.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.485
OBF56326.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
Your Current Organism:
Mycobacterium sp. 85200250816SCH5313054b
NCBI taxonomy Id: 1834092
Other names: M. sp. 852002-50816_SCH5313054-b, Mycobacterium sp. 852002-50816_SCH5313054-b
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.