STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBG29555.1DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)    
Predicted Functional Partners:
OBG29703.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.862
OBG29556.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.698
OBG29704.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
       0.651
OBG27096.1
Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.648
OBG29557.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.
       0.595
OBG29705.1
NADH pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.543
OBG29558.1
Potassium transporter Kef; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.535
Your Current Organism:
Mycobacterium sp. 85200251057SCH5723018
NCBI taxonomy Id: 1834094
Other names: M. sp. 852002-51057_SCH5723018, Mycobacterium sp. 852002-51057_SCH5723018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.