STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBB45610.1Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)    
Predicted Functional Partners:
OBB44727.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.996
OBB41517.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
OBB45608.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
 0.976
OBB45607.1
Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
OBB35890.1
LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.961
OBB45609.1
Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.947
OBB40379.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.910
OBB47383.1
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.908
OBB45616.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 26 family.
 
     0.902
OBB35983.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.894
Your Current Organism:
Mycobacterium sp. 85200251961SCH5331710
NCBI taxonomy Id: 1834105
Other names: M. sp. 852002-51961_SCH5331710, Mycobacterium sp. 852002-51961_SCH5331710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.