STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBC15405.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)    
Predicted Functional Partners:
OBC15484.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.851
OBC09882.1
Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.843
OBC05813.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.815
OBC15401.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.814
OBC02419.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  0.804
OBC15518.1
Type VII secretion protein EccE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.779
OBC02376.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.774
OBC15404.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OBC09894.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.746
OBC09568.1
Cutinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.725
Your Current Organism:
Mycobacterium sp. 85201350091SCH5140682
NCBI taxonomy Id: 1834109
Other names: M. sp. 852013-50091_SCH5140682, Mycobacterium sp. 852013-50091_SCH5140682
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.