STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBH37944.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
OBH37945.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.691
OBH36111.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.550
OBH32581.1
Nitrile hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.547
OBH44480.1
Mce protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.539
OBH40866.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.481
OBH37943.1
30S ribosomal protein S10; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.479
OBH39360.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.476
OBH37941.1
50S ribosomal protein L4; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.465
OBH37940.1
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
OBH37942.1
50S ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
Your Current Organism:
Mycobacterium sp. E183
NCBI taxonomy Id: 1834129
Other names: M. sp. E183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.