STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A5673_11700PE-PGRS family protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (283 aa)    
Predicted Functional Partners:
OBG31868.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.823
OBG34112.1
Sugar dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.799
OBG40417.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.798
OBG25617.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.789
OBG29763.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.781
OBG26921.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.750
OBG38608.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.750
OBG32323.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.750
OBG40005.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
    0.741
OBG34822.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.739
Your Current Organism:
Mycobacterium sp. E3198
NCBI taxonomy Id: 1834143
Other names: M. sp. E3198
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.