STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBG90546.1acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (721 aa)    
Predicted Functional Partners:
OBG97232.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.789
OBG91717.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.769
OBG98846.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.739
OBG97353.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.739
OBG90605.1
Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.731
OBG90604.1
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.730
OBG91594.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.719
OBG93268.1
enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.682
A5697_10560
Glutamine ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.676
OBG90545.1
3-hydroxy-2-methylbutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.676
Your Current Organism:
Mycobacterium sp. E3251
NCBI taxonomy Id: 1834144
Other names: M. sp. E3251
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.