STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMC42399.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
OMC42395.1
Pyrroline-5-carboxylate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.660
OMC42018.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
OMC42557.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.644
OMC42396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.638
OMC42397.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.638
OMC42398.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.638
OMC41145.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.614
OMC41093.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.600
OMC42407.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.543
OMC42394.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.523
Your Current Organism:
Mycobacterium sp. IS1264
NCBI taxonomy Id: 1834158
Other names: M. sp. IS-1264, Mycobacterium sp. IS-1264
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.