STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMC41035.1Limonene-1,2-epoxide hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
OMC49097.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.911
OMC40340.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.859
OMC41172.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.835
OMC41037.1
Signal transduction histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.767
OMC41036.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.733
OMC44854.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.633
OMC44750.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.600
OMC42995.1
acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
OMC50291.1
LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.532
OMC40632.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.522
Your Current Organism:
Mycobacterium sp. IS1264
NCBI taxonomy Id: 1834158
Other names: M. sp. IS-1264, Mycobacterium sp. IS-1264
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