STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMC39162.1Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)    
Predicted Functional Partners:
OMC39161.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.976
OMC39160.1
rRNA maturation RNase YbeY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.956
OMC39163.1
GTPase Era; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.951
OMC46485.1
Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.920
OMC39159.1
Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.915
OMC44808.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
OMC39158.1
16S rRNA (uracil(1498)-N(3))-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.678
OMC45304.1
Septation inhibitor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.661
OMC40535.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.655
OMC39234.1
glycine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.641
Your Current Organism:
Mycobacterium sp. IS1264
NCBI taxonomy Id: 1834158
Other names: M. sp. IS-1264, Mycobacterium sp. IS-1264
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