Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OMC50972.1 | OMC53541.1 | A5747_23935 | A5747_18735 | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit B/delta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| OMC50972.1 | OMC54131.1 | A5747_23935 | A5747_16615 | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
| OMC50972.1 | OMC54132.1 | A5747_23935 | A5747_16620 | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
| OMC50972.1 | OMC54233.1 | A5747_23935 | A5747_17185 | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.647 |
| OMC50972.1 | OMC54864.1 | A5747_23935 | A5747_16140 | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | Mycothiol system anti-sigma-R factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.600 |
| OMC50972.1 | OMC55251.1 | A5747_23935 | A5747_14165 | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.646 |
| OMC50972.1 | OMC55674.1 | A5747_23935 | A5747_11930 | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | Chemotaxis protein CheR; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.647 |
| OMC50972.1 | OMC57012.1 | A5747_23935 | A5747_06710 | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | Anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.537 |
| OMC50972.1 | OMC57053.1 | A5747_23935 | A5747_04450 | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.546 |
| OMC53541.1 | OMC50972.1 | A5747_18735 | A5747_23935 | F0F1 ATP synthase subunit B/delta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| OMC53541.1 | OMC54131.1 | A5747_18735 | A5747_16615 | F0F1 ATP synthase subunit B/delta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
| OMC53541.1 | OMC54132.1 | A5747_18735 | A5747_16620 | F0F1 ATP synthase subunit B/delta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.936 |
| OMC53541.1 | OMC54233.1 | A5747_18735 | A5747_17185 | F0F1 ATP synthase subunit B/delta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.991 |
| OMC53541.1 | OMC55251.1 | A5747_18735 | A5747_14165 | F0F1 ATP synthase subunit B/delta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.513 |
| OMC53541.1 | OMC55840.1 | A5747_18735 | A5747_11080 | F0F1 ATP synthase subunit B/delta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor SigE; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.626 |
| OMC53541.1 | OMC57053.1 | A5747_18735 | A5747_04450 | F0F1 ATP synthase subunit B/delta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.626 |
| OMC54131.1 | OMC50972.1 | A5747_16615 | A5747_23935 | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | RNA polymerase sigma factor SigM; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.702 |
| OMC54131.1 | OMC53541.1 | A5747_16615 | A5747_18735 | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | F0F1 ATP synthase subunit B/delta; Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.993 |
| OMC54131.1 | OMC54132.1 | A5747_16615 | A5747_16620 | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| OMC54131.1 | OMC54233.1 | A5747_16615 | A5747_17185 | DNA-directed RNA polymerase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
page 1 of 4