STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMC55756.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)    
Predicted Functional Partners:
OMC53339.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.865
OMC55754.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.832
OMC55552.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.816
OMC55755.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.813
OMC52713.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.811
OMC55783.1
1,4-dihydroxy-2-naphthoyl-CoA synthase; Catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.799
OMC53655.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.752
OMC55057.1
Diacylglycerol O-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.743
OMC56542.1
Ketoacyl reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
0.725
A5747_19585
TetR family transcriptional regulator; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.701
Your Current Organism:
Mycobacterium sp. IS836
NCBI taxonomy Id: 1834160
Other names: M. sp. IS-836, Mycobacterium sp. IS-836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.