STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OMC50928.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)    
Predicted Functional Partners:
OMC50927.1
Type VII secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
OMC50984.1
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
OMC50929.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.619
OMC50983.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.618
OMC50926.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.578
OMC50930.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.462
OMC50931.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.460
Your Current Organism:
Mycobacterium sp. IS836
NCBI taxonomy Id: 1834160
Other names: M. sp. IS-836, Mycobacterium sp. IS-836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.