ANU47880.1 protein (Lachnoclostridium sp. YL32)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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Cooccurrence

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Experiments

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[Homology]

Score

ANU47880.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (75 aa)

Predicted Functional Partners:

ANU47879.1

0.618

ANU47878.1

0.590

ANU47881.1

0.590

A4V08_20805

0.444

Your Current Organism:

Lachnoclostridium sp. YL32

NCBI taxonomy Id: 1834196
Other names: L. sp. YL32

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A4V08_20805	ANU47878.1	A4V08_20805	A4V08_20810	IS110 family transposase; Internal stop; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
A4V08_20805	ANU47879.1	A4V08_20805	A4V08_20815	IS110 family transposase; Internal stop; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Radical SAM/SPASM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
A4V08_20805	ANU47880.1	A4V08_20805	A4V08_20820	IS110 family transposase; Internal stop; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.444
ANU47878.1	A4V08_20805	A4V08_20810	A4V08_20805	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	IS110 family transposase; Internal stop; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
ANU47878.1	ANU47879.1	A4V08_20810	A4V08_20815	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Radical SAM/SPASM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.737
ANU47878.1	ANU47880.1	A4V08_20810	A4V08_20820	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.590
ANU47878.1	ANU47881.1	A4V08_20810	A4V08_20825	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	TIGR04076 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.459
ANU47879.1	A4V08_20805	A4V08_20815	A4V08_20805	Radical SAM/SPASM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	IS110 family transposase; Internal stop; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.901
ANU47879.1	ANU47878.1	A4V08_20815	A4V08_20810	Radical SAM/SPASM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.737
ANU47879.1	ANU47880.1	A4V08_20815	A4V08_20820	Radical SAM/SPASM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.618
ANU47879.1	ANU47881.1	A4V08_20815	A4V08_20825	Radical SAM/SPASM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	TIGR04076 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.479
ANU47880.1	A4V08_20805	A4V08_20820	A4V08_20805	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	IS110 family transposase; Internal stop; incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.444
ANU47880.1	ANU47878.1	A4V08_20820	A4V08_20810	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.590
ANU47880.1	ANU47879.1	A4V08_20820	A4V08_20815	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	Radical SAM/SPASM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.618
ANU47880.1	ANU47881.1	A4V08_20820	A4V08_20825	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	TIGR04076 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.590
ANU47881.1	ANU47878.1	A4V08_20825	A4V08_20810	TIGR04076 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.459
ANU47881.1	ANU47879.1	A4V08_20825	A4V08_20815	TIGR04076 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Radical SAM/SPASM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.479
ANU47881.1	ANU47880.1	A4V08_20825	A4V08_20820	TIGR04076 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.	0.590