STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU53042.1Damage-inducible protein J; Derived by automated computational analysis using gene prediction method: Protein Homology. (92 aa)    
Predicted Functional Partners:
ANU53041.1
Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.962
ARE60647.1
Addiction module toxin RelE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.851
ANU55856.1
YafQ family addiction module toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.800
ANU54600.1
Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.756
ANU53112.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.738
ANU53043.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.548
ANU53040.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.414
ANU53046.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.413
Your Current Organism:
Hungateiclostridiaceae bacterium KB18
NCBI taxonomy Id: 1834198
Other names: H. bacterium KB18, Ruminiclostridium sp. KB18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.