STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU53280.1Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)    
Predicted Functional Partners:
ANU53279.1
Formate acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.958
ANU53171.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.896
ANU52593.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.894
ANU52707.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.890
ANU53311.1
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
 
 
 0.890
ANU52638.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.718
ANU53281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.592
ANU53282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.532
ANU54008.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.
    
 0.521
ANU54476.2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.492
Your Current Organism:
Hungateiclostridiaceae bacterium KB18
NCBI taxonomy Id: 1834198
Other names: H. bacterium KB18, Ruminiclostridium sp. KB18
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.