STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANU54484.1GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology. (609 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
  
 0.790
ARE60634.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.767
ANU54485.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
ANU54486.1
CHAP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.741
ANU54487.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.741
ANU54488.1
M18 family aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.648
rplA
50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
   
    0.646
tsf
Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
  
  
 0.626
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
  
 0.596
ANU52983.1
[FeFe] hydrogenase H-cluster maturation GTPase HydF; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.586
Your Current Organism:
Hungateiclostridiaceae bacterium KB18
NCBI taxonomy Id: 1834198
Other names: H. bacterium KB18, Ruminiclostridium sp. KB18
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