Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDE83_003264 | DDE83_005413 | A0A364N7Z3 | A0A364N1Z9 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Ubiquitin-like protein. | 0.463 |
DDE83_003264 | DDE83_008953 | A0A364N7Z3 | A0A364MRY0 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Plasma membrane calcium-transporting atpase 2. | 0.759 |
DDE83_003624 | DDE83_007545 | A0A364N6S5 | A0A364MVR1 | Transcription elongation factor s-ii. | Dna-directed rna polymerase ii subunit rpb9. | 0.993 |
DDE83_003624 | DDE83_007819 | A0A364N6S5 | A0A364MUY9 | Transcription elongation factor s-ii. | Chromodomain-helicase-dna-binding protein 4. | 0.538 |
DDE83_003624 | DDE83_008953 | A0A364N6S5 | A0A364MRY0 | Transcription elongation factor s-ii. | Plasma membrane calcium-transporting atpase 2. | 0.616 |
DDE83_005111 | DDE83_005413 | A0A364N2R3 | A0A364N1Z9 | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | Ubiquitin-like protein. | 0.778 |
DDE83_005111 | DDE83_005707 | A0A364N2R3 | A0A364N0R5 | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | Uncharacterized protein. | 0.532 |
DDE83_005111 | DDE83_005893 | A0A364N2R3 | A0A364N0Q0 | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.628 |
DDE83_005111 | DDE83_007249 | A0A364N2R3 | A0A364MWN6 | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | Acid phosphatase. | 0.636 |
DDE83_005111 | DDE83_008953 | A0A364N2R3 | A0A364MRY0 | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | Plasma membrane calcium-transporting atpase 2. | 0.575 |
DDE83_005413 | DDE83_003264 | A0A364N1Z9 | A0A364N7Z3 | Ubiquitin-like protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.463 |
DDE83_005413 | DDE83_005111 | A0A364N1Z9 | A0A364N2R3 | Ubiquitin-like protein. | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | 0.778 |
DDE83_005413 | DDE83_005707 | A0A364N1Z9 | A0A364N0R5 | Ubiquitin-like protein. | Uncharacterized protein. | 0.790 |
DDE83_005413 | DDE83_005893 | A0A364N1Z9 | A0A364N0Q0 | Ubiquitin-like protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.804 |
DDE83_005413 | DDE83_006295 | A0A364N1Z9 | A0A364MZI3 | Ubiquitin-like protein. | Ubiquitin-conjugating enzyme E2 1; Belongs to the ubiquitin-conjugating enzyme family. | 0.999 |
DDE83_005413 | DDE83_007249 | A0A364N1Z9 | A0A364MWN6 | Ubiquitin-like protein. | Acid phosphatase. | 0.780 |
DDE83_005413 | DDE83_007819 | A0A364N1Z9 | A0A364MUY9 | Ubiquitin-like protein. | Chromodomain-helicase-dna-binding protein 4. | 0.619 |
DDE83_005413 | DDE83_008953 | A0A364N1Z9 | A0A364MRY0 | Ubiquitin-like protein. | Plasma membrane calcium-transporting atpase 2. | 0.673 |
DDE83_005707 | DDE83_005111 | A0A364N0R5 | A0A364N2R3 | Uncharacterized protein. | Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family. | 0.532 |
DDE83_005707 | DDE83_005413 | A0A364N0R5 | A0A364N1Z9 | Uncharacterized protein. | Ubiquitin-like protein. | 0.790 |
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