Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDE83_000044 | DDE83_002128 | A0A364NGS0 | A0A364NB32 | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | Uncharacterized protein. | 0.424 |
DDE83_000044 | DDE83_002563 | A0A364NGS0 | A0A364N9H2 | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | 0.429 |
DDE83_000044 | DDE83_004174 | A0A364NGS0 | A0A364N5H8 | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.424 |
DDE83_000044 | DDE83_005136 | A0A364NGS0 | A0A364N2U2 | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | Uncharacterized protein. | 0.424 |
DDE83_000044 | DDE83_007331 | A0A364NGS0 | A0A364MWE8 | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | RAI1-domain-containing protein. | 0.987 |
DDE83_000044 | DDE83_008171 | A0A364NGS0 | A0A364MU11 | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | DUF618-domain-containing protein. | 0.951 |
DDE83_000276 | DDE83_002128 | A0A364NH15 | A0A364NB32 | DNA-directed RNA polymerase subunit D. | Uncharacterized protein. | 0.935 |
DDE83_000276 | DDE83_002563 | A0A364NH15 | A0A364N9H2 | DNA-directed RNA polymerase subunit D. | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | 0.845 |
DDE83_000276 | DDE83_004174 | A0A364NH15 | A0A364N5H8 | DNA-directed RNA polymerase subunit D. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.961 |
DDE83_000276 | DDE83_005136 | A0A364NH15 | A0A364N2U2 | DNA-directed RNA polymerase subunit D. | Uncharacterized protein. | 0.953 |
DDE83_000276 | DDE83_005493 | A0A364NH15 | A0A364N1L2 | DNA-directed RNA polymerase subunit D. | Duf408 domain-containing protein. | 0.950 |
DDE83_000276 | DDE83_007545 | A0A364NH15 | A0A364MVR1 | DNA-directed RNA polymerase subunit D. | Dna-directed rna polymerase ii subunit rpb9. | 0.999 |
DDE83_000276 | DDE83_008051 | A0A364NH15 | A0A364MUH4 | DNA-directed RNA polymerase subunit D. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
DDE83_000276 | DDE83_008171 | A0A364NH15 | A0A364MU11 | DNA-directed RNA polymerase subunit D. | DUF618-domain-containing protein. | 0.833 |
DDE83_002128 | DDE83_000044 | A0A364NB32 | A0A364NGS0 | Uncharacterized protein. | 5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. | 0.424 |
DDE83_002128 | DDE83_000276 | A0A364NB32 | A0A364NH15 | Uncharacterized protein. | DNA-directed RNA polymerase subunit D. | 0.935 |
DDE83_002128 | DDE83_002563 | A0A364NB32 | A0A364N9H2 | Uncharacterized protein. | RNA polymerase II subunit A C-terminal domain phosphatase SSU72. | 0.879 |
DDE83_002128 | DDE83_005493 | A0A364NB32 | A0A364N1L2 | Uncharacterized protein. | Duf408 domain-containing protein. | 0.868 |
DDE83_002128 | DDE83_007545 | A0A364NB32 | A0A364MVR1 | Uncharacterized protein. | Dna-directed rna polymerase ii subunit rpb9. | 0.935 |
DDE83_002128 | DDE83_008051 | A0A364NB32 | A0A364MUH4 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.953 |
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