STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDE83_006653Nad dependent epimerase; Belongs to the GST superfamily. (477 aa)    
Predicted Functional Partners:
DDE83_003657
40s ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family.
   
  0.826
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.825
DDE83_004527
Ribosomal protein S7e.
   
 0.825
DDE83_002100
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.825
DDE83_000893
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
  0.825
DDE83_000583
40s ribosomal protein s3; Belongs to the universal ribosomal protein uS3 family.
   
  0.825
DDE83_000187
40s ribosomal protein s10-a.
   
  0.825
DDE83_004516
40s ribosomal protein s29.
   
  0.824
DDE83_000597
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
  0.821
DDE83_000332
Ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
  0.820
Your Current Organism:
Stemphylium lycopersici
NCBI taxonomy Id: 183478
Other names: CBS 116585 [[Stemphylium xanthosomatis]], CBS 120325 [[Stemphylium sophorae]], CBS 120326 [[Stemphylium oblongum]], CBS 122639, CBS 122803 [[Stemphylium pyrina]], CBS 124980 [[Stemphylium pruni]], CBS 124981 [[Stemphylium plantaginis]], IMI 98083 [[Stemphylium xanthosomatis]], S. lycopersici, Stemphylium oblongum, Stemphylium oblongum Yong Wang bis & X.G. Zhang, 2009, Stemphylium plantaginis, Stemphylium plantaginis Yong Wang bis & X.G. Zhang, 2006, Stemphylium pruni, Stemphylium pruni Yong Wang bis & X.G. Zhang, 2006, Stemphylium pyrina, Stemphylium pyrina Yong Wang bis & X.G. Zhang, 2009, Stemphylium sophorae, Stemphylium sophorae Yong Wang bis & X.G. Zhang, 2009, Stemphylium xanthosomae, Stemphylium xanthosomatis
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