STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDE83_004433Glycoside hydrolase family 17 protein. (671 aa)    
Predicted Functional Partners:
DDE83_004259
Glycosyltransferase family 48 protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.789
DDE83_008287
Glycoside hydrolase family 32 protein; Belongs to the glycosyl hydrolase 32 family.
     
 0.774
DDE83_002502
Rho-type gtpase-activating protein 2.
   
 
 0.770
DDE83_002389
Calmodulin-binding protein sha1.
   
   0.674
DDE83_005608
Kinesin family protein-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
    0.659
DDE83_003767
Glycoside hydrolase family 5 protein.
   
 
 0.596
DDE83_006659
RhoGAP-domain-containing protein.
     
 0.579
DDE83_002782
Cell division control protein 42.
    
 0.578
DDE83_005810
Glycoside hydrolase family 55 protein.
    
  0.576
DDE83_008719
Glycoside hydrolase family 31 protein.
    
  0.570
Your Current Organism:
Stemphylium lycopersici
NCBI taxonomy Id: 183478
Other names: CBS 116585 [[Stemphylium xanthosomatis]], CBS 120325 [[Stemphylium sophorae]], CBS 120326 [[Stemphylium oblongum]], CBS 122639, CBS 122803 [[Stemphylium pyrina]], CBS 124980 [[Stemphylium pruni]], CBS 124981 [[Stemphylium plantaginis]], IMI 98083 [[Stemphylium xanthosomatis]], S. lycopersici, Stemphylium oblongum, Stemphylium oblongum Yong Wang bis & X.G. Zhang, 2009, Stemphylium plantaginis, Stemphylium plantaginis Yong Wang bis & X.G. Zhang, 2006, Stemphylium pruni, Stemphylium pruni Yong Wang bis & X.G. Zhang, 2006, Stemphylium pyrina, Stemphylium pyrina Yong Wang bis & X.G. Zhang, 2009, Stemphylium sophorae, Stemphylium sophorae Yong Wang bis & X.G. Zhang, 2009, Stemphylium xanthosomae, Stemphylium xanthosomatis
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