Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DDE83_000826 | DDE83_004373 | A0A364NEW7 | A0A364N4Q7 | dUTP diphosphatase. | Low temperature requirement a protein. | 0.682 |
DDE83_000826 | DDE83_006185 | A0A364NEW7 | A0A364MZQ3 | dUTP diphosphatase. | Histone-fold containing protein. | 0.965 |
DDE83_000904 | DDE83_004373 | A0A364NEH8 | A0A364N4Q7 | PIN domain-like protein. | Low temperature requirement a protein. | 0.660 |
DDE83_002022 | DDE83_003271 | A0A364NBT2 | A0A364N865 | F-box domain protein. | Peptidase family m20 m25 m40 protein. | 0.671 |
DDE83_002022 | DDE83_004373 | A0A364NBT2 | A0A364N4Q7 | F-box domain protein. | Low temperature requirement a protein. | 0.759 |
DDE83_002022 | DDE83_004854 | A0A364NBT2 | A0A364N388 | F-box domain protein. | S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | 0.615 |
DDE83_002022 | DDE83_007537 | A0A364NBT2 | A0A364MVX7 | F-box domain protein. | Snf5-domain-containing protein. | 0.666 |
DDE83_002942 | DDE83_004373 | A0A364N995 | A0A364N4Q7 | Pas domain-containing protein. | Low temperature requirement a protein. | 0.651 |
DDE83_002942 | DDE83_004854 | A0A364N995 | A0A364N388 | Pas domain-containing protein. | S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | 0.574 |
DDE83_002942 | DDE83_005313 | A0A364N995 | A0A364N297 | Pas domain-containing protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.471 |
DDE83_002942 | DDE83_007537 | A0A364N995 | A0A364MVX7 | Pas domain-containing protein. | Snf5-domain-containing protein. | 0.477 |
DDE83_003271 | DDE83_002022 | A0A364N865 | A0A364NBT2 | Peptidase family m20 m25 m40 protein. | F-box domain protein. | 0.671 |
DDE83_003271 | DDE83_004373 | A0A364N865 | A0A364N4Q7 | Peptidase family m20 m25 m40 protein. | Low temperature requirement a protein. | 0.667 |
DDE83_003271 | DDE83_004854 | A0A364N865 | A0A364N388 | Peptidase family m20 m25 m40 protein. | S-adenosyl-L-methionine-dependent methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | 0.792 |
DDE83_003271 | DDE83_005313 | A0A364N865 | A0A364N297 | Peptidase family m20 m25 m40 protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.530 |
DDE83_003271 | DDE83_007537 | A0A364N865 | A0A364MVX7 | Peptidase family m20 m25 m40 protein. | Snf5-domain-containing protein. | 0.691 |
DDE83_004373 | DDE83_000826 | A0A364N4Q7 | A0A364NEW7 | Low temperature requirement a protein. | dUTP diphosphatase. | 0.682 |
DDE83_004373 | DDE83_000904 | A0A364N4Q7 | A0A364NEH8 | Low temperature requirement a protein. | PIN domain-like protein. | 0.660 |
DDE83_004373 | DDE83_002022 | A0A364N4Q7 | A0A364NBT2 | Low temperature requirement a protein. | F-box domain protein. | 0.759 |
DDE83_004373 | DDE83_002942 | A0A364N4Q7 | A0A364N995 | Low temperature requirement a protein. | Pas domain-containing protein. | 0.651 |
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