STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKI38995.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (734 aa)    
Predicted Functional Partners:
OKI38911.1
Type VII secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.970
OKI38898.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.
   
 
 0.935
OKI13874.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.924
OKI38994.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.776
OKI38991.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OKI38992.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OKI38993.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OKI17440.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.738
OKI15536.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.724
OKI21117.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
   0.691
Your Current Organism:
Saccharothrix sp. CB00851
NCBI taxonomy Id: 1835005
Other names: S. sp. CB00851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.