STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OKI36663.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)    
Predicted Functional Partners:
OKI36558.1
Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.988
OKI36557.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.984
OKI37493.1
Polysaccharide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.952
OKI32055.1
Polysaccharide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.952
A6A25_26700
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.912
OKI13956.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.895
OKI18495.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.894
OKI37494.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
  0.880
OKI16175.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.877
OKI26964.1
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.855
Your Current Organism:
Saccharothrix sp. CB00851
NCBI taxonomy Id: 1835005
Other names: S. sp. CB00851
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.