STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1F5LAB2Nickel/cobalt efflux system; Belongs to the NiCoT transporter (TC 2.A.52) family. (465 aa)    
Predicted Functional Partners:
A0A1F5LDW6
Ubiquitin carboxyl-terminal hydrolase.
    
  0.582
A0A1F5LV44
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.481
A0A1F5LLU1
Uncharacterized protein.
    
 0.477
A0A1F5L9P3
t-SNARE coiled-coil homology domain-containing protein.
    
  0.460
A0A1F5LF88
Uncharacterized protein.
    
  0.451
A0A1F5LXF8
ENTH domain-containing protein.
    
  0.443
A0A1F5L6L6
Uncharacterized protein.
    
  0.441
A0A1F5LXB2
Uncharacterized protein.
    
  0.432
A0A1F5LIA3
Uncharacterized protein.
   
 0.424
A0A1F5L165
AAA domain-containing protein.
    
  0.412
Your Current Organism:
Penicillium arizonense
NCBI taxonomy Id: 1835702
Other names: CBS 141311, Herb. C-F-101845, IBT 12289, P. arizonense, Penicillium arizonense Frisvad, Grijseels and J.C. Nielsen, 2016, Penicillium sp. JCN-2016
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