STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAV61224.1DNA alkylation repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)    
Predicted Functional Partners:
OAV61225.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
    0.625
OAV61223.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.551
OAV61277.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.544
OAV61835.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.476
OAV59899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.433
OAV62069.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.422
OAV60678.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.422
OAV61516.1
IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.419
OAV61222.1
Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.403
OAV62080.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.401
Your Current Organism:
Enteractinococcus helveticum
NCBI taxonomy Id: 1837282
Other names: E. helveticum, Enteractinococcus sp. UASWS1574, strain UASWS1574
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.