STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAV60153.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)    
Predicted Functional Partners:
OAV60152.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.834
OAV51885.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the sigma-70 factor family.
   
 
 0.826
OAV59794.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.686
OAV51206.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.665
OAV61772.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
    0.665
OAV51839.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.579
cobB
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.
   
    0.579
OAV59148.1
NAD-dependent protein deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.579
A6F49_05305
FAD-containing monooxygenase EthA; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.555
OAV62143.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.553
Your Current Organism:
Enteractinococcus helveticum
NCBI taxonomy Id: 1837282
Other names: E. helveticum, Enteractinococcus sp. UASWS1574, strain UASWS1574
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.