STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAV59434.1Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)    
Predicted Functional Partners:
OAV51529.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.667
OAV59433.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.600
OAV62154.1
Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.587
OAV62155.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.573
OAV61867.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.535
OAV61876.1
N-carbamoylsarcosine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.526
pyrR
Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
    
  0.524
OAV61255.1
Benzene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.517
OAV62722.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.489
OAV62433.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
  0.443
Your Current Organism:
Enteractinococcus helveticum
NCBI taxonomy Id: 1837282
Other names: E. helveticum, Enteractinococcus sp. UASWS1574, strain UASWS1574
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