STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900025055_01148Unannotated protein. (197 aa)    
Predicted Functional Partners:
GCA_900025055_01147
Unannotated protein.
 
 
 0.989
GCA_900025055_01150
Unannotated protein.
 
 
 0.907
GCA_900025055_01151
Unannotated protein.
 
 
 0.848
GCA_900025055_01149
Unannotated protein.
       0.840
GCA_900025055_01152
Unannotated protein.
 
  
 0.788
GCA_900025055_01146
Unannotated protein.
  
  
 0.754
GCA_900025055_01589
Unannotated protein.
    
  0.668
GCA_900025055_00341
Unannotated protein.
 
 
 0.663
GCA_900025055_00343
Unannotated protein.
    
  0.661
GCA_900025055_01521
Unannotated protein.
    
  0.660
Your Current Organism:
uncultured Methanoculleus sp.
NCBI taxonomy Id: 183762
Other names: u. Methanoculleus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.