STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900025055_01206Unannotated protein. (507 aa)    
Predicted Functional Partners:
GCA_900025055_01735
Unannotated protein.
 
  
 0.978
GCA_900025055_00644
Unannotated protein.
 
  
 0.899
GCA_900025055_00824
Unannotated protein.
    
 0.875
GCA_900025055_01956
Unannotated protein.
    
 0.837
GCA_900025055_01770
Unannotated protein.
 
  
 0.796
GCA_900025055_01812
Unannotated protein.
    
 0.795
GCA_900025055_02063
Unannotated protein.
     
 0.789
GCA_900025055_01207
Unannotated protein.
       0.777
GCA_900025055_00973
Unannotated protein.
 
  
  0.763
GCA_900025055_01512
Unannotated protein.
 
  
 0.762
Your Current Organism:
uncultured Methanoculleus sp.
NCBI taxonomy Id: 183762
Other names: u. Methanoculleus sp.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.