Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
KII00370.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
 0.995
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
     
 0.831
KIH97963.1
Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.830
KII00369.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.761
KIH99036.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.709
KIH98670.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.695
KIH96931.1
Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.692
KII00335.1
dUTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
whiA
Sporulation protein; Involved in cell division and chromosome segregation.
  
     0.617
KIH99454.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.584
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
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