Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KII00253.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)    
Predicted Functional Partners:
alc
Allantoicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the allantoicase family.
    
  0.735
KIH98533.1
OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.713
KIH98576.1
Allantoicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.681
KIH96869.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.681
KIH99843.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.461
KII00252.1
Spermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.429
KIH98448.1
Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
  
     0.428
KIH99256.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.425
KIH97254.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
    
 0.425
KIH99501.1
Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.413
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
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