STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KII00002.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)    
Predicted Functional Partners:
KII00001.1
Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
KII00003.1
Type II secretion system (T2SS), F family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.981
KIH97648.1
Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.967
KIH99023.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.778
KIH99044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.741
KIH97612.1
Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.694
KIH97647.1
Type II secretion protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.645
KII00155.1
Pilus assembly protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.614
KIH99032.1
Plasmid partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.587
KIH96654.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.587
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.