STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH99915.1Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology. (403 aa)    
Predicted Functional Partners:
KII00330.1
FAD-linked oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.812
KIH98524.1
SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.634
KIH98525.1
SGNH hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
KIH96527.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.576
KIH98881.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.528
KIH96608.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.468
KIH98404.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.418
KIH99848.1
FAD-binding dehydrogenase; Proposed role in polysaccahride synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.409
KIH97236.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.401
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
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