STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH99754.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)    
Predicted Functional Partners:
KII00439.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.971
KIH98949.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.798
KIH99786.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.777
KIH99755.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
KIH98091.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.769
KIH99774.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.729
KIH97724.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.715
KIH96609.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.683
KIH98467.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.679
KIH97904.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.659
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.