Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KIH99095.1Oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)    
Predicted Functional Partners:
KIH99140.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.856
KII00124.1
Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.684
KIH99094.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.667
KIH99630.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.564
KIH96855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.564
KII00123.1
Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.557
KIH96376.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.464
KII00530.1
Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.443
KII00055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.427
KII00221.1
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
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