Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KIH99038.1 | KIH99039.1 | LP52_10060 | LP52_10065 | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.665 |
KIH99039.1 | KIH99038.1 | LP52_10065 | LP52_10060 | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.665 |
KIH99039.1 | rpmE | LP52_10065 | LP52_20120 | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.473 |
KIH99039.1 | rpsO | LP52_10065 | LP52_14075 | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.539 |
rpmE | KIH99039.1 | LP52_20120 | LP52_10065 | 50S ribosomal protein L31; Binds the 23S rRNA. | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.473 |
rpmE | rpsO | LP52_20120 | LP52_14075 | 50S ribosomal protein L31; Binds the 23S rRNA. | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.999 |
rpsO | KIH99039.1 | LP52_14075 | LP52_10065 | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.539 |
rpsO | rpmE | LP52_14075 | LP52_20120 | 30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.999 |