STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH98794.1Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)    
Predicted Functional Partners:
KIH99225.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.825
KIH98924.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.787
KIH98936.1
Fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.784
KIH98175.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.784
KIH98398.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.724
KII00439.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.700
KIH96367.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.697
KIH98822.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.692
KIH98823.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.692
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.683
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
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