STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KIH98770.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)    
Predicted Functional Partners:
KIH96695.1
Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.725
KIH98937.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.598
KII00328.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.597
KIH97260.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.595
KII00657.1
Conjugal transfer protein TrbL; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.585
KIH98228.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.563
KII00626.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.557
KII00133.1
Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.544
KIH96776.1
Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
KIH97055.1
Forkhead-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
Your Current Organism:
Streptomonospora alba
NCBI taxonomy Id: 183763
Other names: CCTCC AA 001013, DSM 44588, JCM 12680, S. alba, Streptimonospora albus, Streptomonospora alba Li et al. 2003, Streptomonospora albus, YIM 90003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.